Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
ABK34556.1
putative DNA-directed RNA polymerase domain 5 [White sturgeon epivirus]
...
Query length:
81 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase III largest subunit, putative
...
DNA-directed RNA polymerase III largest subunit, putative [Leishmania donovani]
1590 aa protein
accession:XP_003864203.1
RNA polymerase II largest subunit
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RNA polymerase II largest subunit [Dictyostelium discoideum AX4]
1727 aa protein
accession:XP_641735.1
DNA-directed RNA polymerase II subunit RPB1
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DNA-directed RNA polymerase II subunit RPB1 [Danio rerio]
1965 aa protein
accession:XP_005156282.1
DNA-directed RNA polymerase II subunit RPB1
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DNA-directed RNA polymerase II subunit RPB1 [Homo sapiens]
1970 aa protein
accession:NP_000928.1
Query: putative DNA-directed RNA polymerase domain 5
...
putative DNA-directed RNA polymerase domain 5 [White sturgeon epivirus]
81 aa protein
accession:ABK34556.1
DNA-directed RNA polymerase subunit A''
...
DNA-directed RNA polymerase subunit A'' [Sulfolobus acidocaldarius]
393 aa protein
accession:WP_011277573.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase III largest subunit, putative [Leishmania donovani]
1590 aa protein
accession:XP_003864203.1
RNA polymerase II largest subunit [Dictyostelium discoideum AX4]
1727 aa protein
accession:XP_641735.1
DNA-directed RNA polymerase II subunit RPB1 [Danio rerio]
1965 aa protein
accession:XP_005156282.1
DNA-directed RNA polymerase II subunit RPB1 [Homo sapiens]
1970 aa protein
accession:NP_000928.1
putative DNA-directed RNA polymerase domain 5 [White sturgeon epivirus]
81 aa protein
accession:ABK34556.1
DNA-directed RNA polymerase subunit A'' [Sulfolobus acidocaldarius]
393 aa protein
accession:WP_011277573.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 60.1 | 60.1 | 100% | 6e-11 | 39.51% | WP_011277573.1 | |
| 2 | 54.3 | 54.3 | 100% | 6e-09 | 34.57% | XP_641735.1 | |
| 3 | 53.1 | 53.1 | 93% | 2e-08 | 36.84% | XP_003864203.1 | |
| 4 | 52.8 | 52.8 | 100% | 2e-08 | 34.57% | XP_005156282.1 | |
| 5 | 52.8 | 52.8 | 100% | 2e-08 | 34.57% | NP_000928.1 |