Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ABQ65653.1 recombination activating protein [Ocyphaps lophotes] ... Query length: 881 aa

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

RING zinc finger-containing protein ...

RING zinc finger-containing protein [Dictyostelium discoideum AX4]

355 aa protein

accession:XP_647367.1

Alignment Sequence Identical proteins

Query: recombination activating protein ...

recombination activating protein [Ocyphaps lophotes]

881 aa protein

accession:ABQ65653.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_005163033.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	1486	1486	98%	0.0	80.02%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	1455	1455	98%	0.0	78.11%	NP_033045.2
3 Select seq ref\|XP_005163033.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	1106	1106	98%	0.0	60.31%	XP_005163033.1
4 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	55.8	55.8	9%	2e-06	32.56%	NP_587701.1
5 Select seq ref\|XP_647367.1\|	RING zinc finger-containing protein [Dictyostelium discoideum AX4]	47.4	47.4	7%	5e-04	37.50%	XP_647367.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments