Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ACJ05091.1 huntingtin [Macaca mulatta] ... Query length: 40 aa

huntingtin isoform 2 ...

huntingtin isoform 2 [Homo sapiens]

3144 aa protein

accession:NP_002102.4

Alignment Sequence Identical proteins

huntingtin ...

huntingtin [Mus musculus]

3120 aa protein

accession:NP_034544.1

Alignment Sequence Identical proteins

Query: huntingtin ...

huntingtin [Macaca mulatta]

40 aa protein

accession:ACJ05091.1

Sequence Identical proteins

huntingtin isoform X1 ...

huntingtin isoform X1 [Danio rerio]

3184 aa protein

accession:XP_009291239.1

Alignment Sequence Identical proteins

huntingtin isoform X4 ...

huntingtin isoform X4 [Danio rerio]

3106 aa protein

accession:XP_009291248.1

Alignment Sequence Identical proteins

huntingtin ...

huntingtin [Danio rerio]

3121 aa protein

accession:NP_571093.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_009291239.1\|	huntingtin isoform X1 [Danio rerio]	43.9	43.9	52%	6e-06	95.24%	XP_009291239.1
2 Select seq ref\|NP_002102.4\|	huntingtin isoform 2 [Homo sapiens]	37.4	37.4	55%	0.001	100.00%	NP_002102.4
3 Select seq ref\|NP_034544.1\|	huntingtin [Mus musculus]	35.0	35.0	80%	0.009	84.38%	NP_034544.1
4 Select seq ref\|NP_571093.1\|	huntingtin [Danio rerio]	43.9	43.9	52%	6e-06	95.24%	NP_571093.1
5 Select seq ref\|XP_009291248.1\|	huntingtin isoform X4 [Danio rerio]	43.9	43.9	52%	6e-06	95.24%	XP_009291248.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments