Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ACT36916.1 voltage-gated sodium channel [Nerodia sipedon] ... Query length: 18 aa

sodium channel protein type 10 subunit alpha isoform X1 ...

sodium channel protein type 10 subunit alpha isoform X1 [Homo sapiens]

1959 aa protein

accession:XP_005265428.1

Alignment Sequence Identical proteins

sodium channel protein type 10 subunit alpha isoform X2 ...

sodium channel protein type 10 subunit alpha isoform X2 [Homo sapiens]

1958 aa protein

accession:XP_011532295.1

Alignment Sequence Identical proteins

Query: voltage-gated sodium channel ...

voltage-gated sodium channel [Nerodia sipedon]

18 aa protein

accession:ACT36916.1

Sequence Identical proteins

sodium channel protein type 4 subunit alpha A ...

sodium channel protein type 4 subunit alpha A [Danio rerio]

1829 aa protein

accession:NP_001034914.1

Alignment Sequence Identical proteins

sodium channel protein type 4 subunit alpha ...

sodium channel protein type 4 subunit alpha [Rattus norvegicus]

1840 aa protein

accession:NP_037310.2

Alignment Sequence Identical proteins

sodium channel protein type 4 subunit alpha ...

sodium channel protein type 4 subunit alpha [Mus musculus]

1841 aa protein

accession:NP_001390570.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_005265428.1\|	sodium channel protein type 10 subunit alpha isoform X1 [Homo sapiens]	43.9	43.9	100%	2e-06	100.00%	XP_005265428.1
2 Select seq ref\|NP_001034914.1\|	sodium channel protein type 4 subunit alpha A [Danio rerio]	43.1	43.1	100%	3e-06	100.00%	NP_001034914.1
3 Select seq ref\|NP_037310.2\|	sodium channel protein type 4 subunit alpha [Rattus norvegicus]	43.1	43.1	100%	3e-06	100.00%	NP_037310.2
4 Select seq ref\|NP_001390570.1\|	sodium channel protein type 4 subunit alpha [Mus musculus]	43.1	43.1	100%	4e-06	100.00%	NP_001390570.1
5 Select seq ref\|XP_011532295.1\|	sodium channel protein type 10 subunit alpha isoform X2 [Homo sapiens]	43.9	43.9	100%	2e-06	100.00%	XP_011532295.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments