Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ADE48581.1 POU domain transcription factor OCT4-pg4 [Homo sapiens] ... Query length: 286 aa

POU domain, class 5, transcription factor 1 isoform X1 ...

POU domain, class 5, transcription factor 1 isoform X1 [Danio rerio]

471 aa protein

accession:XP_005161160.1

Alignment Sequence Identical proteins

ventral veins lacking, isoform D ...

ventral veins lacking, isoform D [Drosophila melanogaster]

427 aa protein

accession:NP_001286957.1

Alignment Sequence Identical proteins

Homeobox protein ceh-6 ...

Homeobox protein ceh-6 [Caenorhabditis elegans]

380 aa protein

accession:NP_492304.1

Alignment Sequence Identical proteins

POU domain, class 5, transcription factor 1 isoform 1 ...

POU domain, class 5, transcription factor 1 isoform 1 [Mus musculus]

352 aa protein

accession:NP_038661.2

Alignment Sequence Identical proteins

Query: POU domain transcription factor OCT4-pg4 ...

POU domain transcription factor OCT4-pg4 [Homo sapiens]

286 aa protein

accession:ADE48581.1

Sequence Identical proteins

POU domain, class 5, transcription factor 1 isoform 1 ...

POU domain, class 5, transcription factor 1 isoform 1 [Homo sapiens]

360 aa protein

accession:NP_002692.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_002692.2\|	POU domain, class 5, transcription factor 1 isoform 1 [Homo sapiens]	467	467	92%	9e-166	93.96%	NP_002692.2
2 Select seq ref\|NP_038661.2\|	POU domain, class 5, transcription factor 1 isoform 1 [Mus musculus]	426	426	99%	6e-150	79.58%	NP_038661.2
3 Select seq ref\|XP_005161160.1\|	POU domain, class 5, transcription factor 1 isoform X1 [Danio rerio]	199	199	50%	2e-59	65.75%	XP_005161160.1
4 Select seq ref\|NP_001286957.1\|	ventral veins lacking, isoform D [Drosophila melanogaster]	179	179	50%	6e-52	62.50%	NP_001286957.1
5 Select seq ref\|NP_492304.1\|	Homeobox protein ceh-6 [Caenorhabditis elegans]	163	163	50%	2e-46	57.24%	NP_492304.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments