Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AET12054.1 recombination activating protein 1 [Amazona pretrei] ... Query length: 486 aa

hypothetical protein DDB_G0278183 ...

hypothetical protein DDB_G0278183 [Dictyostelium discoideum AX4]

601 aa protein

accession:XP_642185.1

Alignment Sequence Identical proteins

uncharacterized protein Dmel_CG9014, isoform B ...

uncharacterized protein Dmel_CG9014, isoform B [Drosophila melanogaster]

328 aa protein

accession:NP_001285905.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Amazona pretrei]

486 aa protein

accession:AET12054.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_005163033.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	754	754	100%	0.0	72.39%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	742	742	100%	0.0	71.25%	NP_033045.2
3 Select seq ref\|XP_005163033.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	501	501	97%	2e-166	49.70%	XP_005163033.1
4 Select seq ref\|XP_642185.1\|	hypothetical protein DDB_G0278183 [Dictyostelium discoideum AX4]	49.3	49.3	15%	7e-05	37.18%	XP_642185.1
5 Select seq ref\|NP_001285905.1\|	uncharacterized protein Dmel_CG9014, isoform B [Drosophila melanogaster]	45.8	45.8	18%	6e-04	30.11%	NP_001285905.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments