Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AFA85030.1 RNA polymerase beta subunit [Aeromonas allosaccharophila] ... Query length: 142 aa

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Streptomyces]

1161 aa protein

accession:WP_011029792.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Shewanella oneidensis]

1345 aa protein

accession:WP_011070610.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]

1342 aa protein

accession:WP_000263098.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa]

1357 aa protein

accession:WP_003114335.1

Alignment Sequence Identical proteins

Query: RNA polymerase beta subunit ...

RNA polymerase beta subunit [Aeromonas allosaccharophila]

142 aa protein

accession:AFA85030.1

Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Neisseria meningitidis]

1392 aa protein

accession:WP_105182946.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_011070610.1\|	DNA-directed RNA polymerase subunit beta [Shewanella oneidensis]	257	257	100%	4e-79	83.80%	WP_011070610.1
2 Select seq ref\|WP_000263098.1\|	DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]	243	243	100%	4e-74	78.17%	WP_000263098.1
3 Select seq ref\|WP_105182946.1\|	DNA-directed RNA polymerase subunit beta [Neisseria meningitidis]	239	239	100%	6e-73	76.76%	WP_105182946.1
4 Select seq ref\|WP_003114335.1\|	DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa]	215	215	100%	2e-64	69.72%	WP_003114335.1
5 Select seq ref\|WP_011029792.1\|	DNA-directed RNA polymerase subunit beta [Streptomyces]	201	201	100%	1e-59	64.34%	WP_011029792.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments