Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AFD23085.1
skeletal muscle sodium channel Nav1.4 [Clonophis kirtlandii]
...
Query length:
69 aa
DOMAINS: and other(s) domains
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sodium channel, voltage-gated, type I-like, alpha
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sodium channel, voltage-gated, type I-like, alpha [Danio rerio]
1955 aa protein
accession:NP_956426.2
Query: skeletal muscle sodium channel Nav1.4
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skeletal muscle sodium channel Nav1.4 [Clonophis kirtlandii]
69 aa protein
accession:AFD23085.1
sodium channel protein type 2 subunit alpha
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sodium channel protein type 2 subunit alpha [Rattus norvegicus]
2005 aa protein
accession:NP_036779.2
sodium channel protein type 2 subunit alpha isoform X2
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sodium channel protein type 2 subunit alpha isoform X2 [Rattus norvegicus]
2005 aa protein
accession:XP_063139176.1
sodium channel protein type 2 subunit alpha
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sodium channel protein type 2 subunit alpha [Mus musculus]
2006 aa protein
accession:NP_001092768.1
sodium channel protein type 2 subunit alpha
...
sodium channel protein type 2 subunit alpha [Mus musculus]
2006 aa protein
accession:NP_001333608.1
DOMAINS: and other(s) domains
...
sodium channel, voltage-gated, type I-like, alpha [Danio rerio]
1955 aa protein
accession:NP_956426.2
skeletal muscle sodium channel Nav1.4 [Clonophis kirtlandii]
69 aa protein
accession:AFD23085.1
sodium channel protein type 2 subunit alpha [Rattus norvegicus]
2005 aa protein
accession:NP_036779.2
sodium channel protein type 2 subunit alpha isoform X2 [Rattus norvegicus]
2005 aa protein
accession:XP_063139176.1
sodium channel protein type 2 subunit alpha [Mus musculus]
2006 aa protein
accession:NP_001092768.1
sodium channel protein type 2 subunit alpha [Mus musculus]
2006 aa protein
accession:NP_001333608.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 149 | 149 | 100% | 2e-42 | 89.86% | NP_036779.2 | |
| 2 | 149 | 149 | 100% | 2e-42 | 89.86% | NP_001092768.1 | |
| 3 | 145 | 145 | 100% | 4e-41 | 88.41% | NP_956426.2 | |
| 4 | 149 | 149 | 100% | 2e-42 | 89.86% | XP_063139176.1 | |
| 5 | 149 | 149 | 100% | 2e-42 | 89.86% | NP_001333608.1 |