Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AFJ22117.1
signal recognition particle protein 54k [Plutarchusia chelopus]
...
Query length:
444 aa
DOMAINS: and other(s) domains
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signal recognition particle subunit SRP54
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signal recognition particle subunit SRP54 [Plasmodium falciparum 3D7]
500 aa protein
accession:XP_001348651.1
signal recognition particle, putative
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signal recognition particle, putative [Leishmania donovani]
519 aa protein
accession:XP_003861164.1
signal recognition particle subunit Srp54
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signal recognition particle subunit Srp54 [Schizosaccharomyces pombe]
522 aa protein
accession:NP_588209.1
Query: signal recognition particle protein 54k
...
signal recognition particle protein 54k [Plutarchusia chelopus]
444 aa protein
accession:AFJ22117.1
signal recognition particle 54 kDa protein isoform 1
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signal recognition particle 54 kDa protein isoform 1 [Mus musculus]
504 aa protein
accession:NP_001400562.1
signal recognition particle subunit SRP54 isoform X2
...
signal recognition particle subunit SRP54 isoform X2 [Homo sapiens]
400 aa protein
accession:XP_047287683.1
DOMAINS: and other(s) domains
...
signal recognition particle subunit SRP54 [Plasmodium falciparum 3D7]
500 aa protein
accession:XP_001348651.1
signal recognition particle, putative [Leishmania donovani]
519 aa protein
accession:XP_003861164.1
signal recognition particle subunit Srp54 [Schizosaccharomyces pombe]
522 aa protein
accession:NP_588209.1
signal recognition particle protein 54k [Plutarchusia chelopus]
444 aa protein
accession:AFJ22117.1
signal recognition particle 54 kDa protein isoform 1 [Mus musculus]
504 aa protein
accession:NP_001400562.1
signal recognition particle subunit SRP54 isoform X2 [Homo sapiens]
400 aa protein
accession:XP_047287683.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 744 | 744 | 100% | 0.0 | 78.38% | NP_001400562.1 | |
| 2 | 626 | 626 | 82% | 0.0 | 80.11% | XP_047287683.1 | |
| 3 | 466 | 466 | 97% | 6e-161 | 53.74% | NP_588209.1 | |
| 4 | 461 | 461 | 99% | 7e-159 | 51.68% | XP_003861164.1 | |
| 5 | 450 | 450 | 100% | 8e-155 | 48.77% | XP_001348651.1 |