Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AFJ24097.1 recombination activating protein 1 [Carlia rostralis] ... Query length: 270 aa

DNA repair protein RAD16 ...

DNA repair protein RAD16 [Saccharomyces cerevisiae S288C]

790 aa protein

accession:NP_009672.1

Alignment Sequence Identical proteins

Zinc finger (C3HC4-type RING finger) family protein ...

Zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]

617 aa protein

accession:NP_198771.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Carlia rostralis]

270 aa protein

accession:AFJ24097.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Danio rerio]

1057 aa protein

accession:NP_571464.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	297	297	79%	2e-92	62.50%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	290	290	79%	8e-90	59.81%	NP_033045.2
3 Select seq ref\|NP_571464.1\|	V(D)J recombination-activating protein 1 [Danio rerio]	146	146	85%	2e-38	34.38%	NP_571464.1
4 Select seq ref\|NP_009672.1\|	DNA repair protein RAD16 [Saccharomyces cerevisiae S288C]	42.4	42.4	13%	0.004	41.67%	NP_009672.1
5 Select seq ref\|NP_198771.1\|	Zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]	41.2	41.2	12%	0.009	51.52%	NP_198771.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments