Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AFJ24173.1 recombination activating protein 1 [Morethia boulengeri] ... Query length: 268 aa

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Morethia boulengeri]

268 aa protein

accession:AFJ24173.1

Sequence Identical proteins

DNA repair protein RAD16 ...

DNA repair protein RAD16 [Saccharomyces cerevisiae S288C]

790 aa protein

accession:NP_009672.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF170 isoform X1 ...

E3 ubiquitin-protein ligase RNF170 isoform X1 [Rattus norvegicus]

286 aa protein

accession:XP_063131693.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_009296061.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]

1043 aa protein

accession:XP_047283340.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047283340.1\|	V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]	293	293	83%	3e-91	59.65%	XP_047283340.1
2 Select seq ref\|XP_009296061.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	143	143	86%	1e-37	32.39%	XP_009296061.1
3 Select seq ref\|NP_009672.1\|	DNA repair protein RAD16 [Saccharomyces cerevisiae S288C]	41.2	41.2	13%	0.004	38.89%	NP_009672.1
4 Select seq ref\|XP_063131693.1\|	E3 ubiquitin-protein ligase RNF170 isoform X1 [Rattus norvegicus]	40.0	40.0	33%	0.006	32.63%	XP_063131693.1
5 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	38.5	38.5	26%	0.029	29.17%	XP_001351466.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments