Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AFJ54142.1 rhodopsin [Zhangixalus wui] ... Query length: 105 aa

rhodopsin 3 ...

rhodopsin 3 [Drosophila melanogaster]

383 aa protein

accession:NP_524411.1

Alignment Sequence Identical proteins

visual pigment-like receptor peropsin ...

visual pigment-like receptor peropsin [Danio rerio]

334 aa protein

accession:NP_001004654.1

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Zhangixalus wui]

105 aa protein

accession:AFJ54142.1

Sequence Identical proteins

extra-ocular rhodopsin ...

extra-ocular rhodopsin [Danio rerio]

354 aa protein

accession:NP_571287.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Mus musculus]

348 aa protein

accession:NP_663358.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	176	176	98%	1e-54	80.58%	NP_000530.1
2 Select seq ref\|NP_663358.1\|	rhodopsin [Mus musculus]	171	171	98%	8e-53	78.64%	NP_663358.1
3 Select seq ref\|NP_571287.1\|	extra-ocular rhodopsin [Danio rerio]	166	166	98%	1e-50	75.73%	NP_571287.1
4 Select seq NP_001004654.1	visual pigment-like receptor peropsin [Danio rerio]	47.4	47.4	71%	3e-06	29.33%	NP_001004654.1
5 Select seq ref\|NP_524411.1\|	rhodopsin 3 [Drosophila melanogaster]	40.0	40.0	80%	0.001	32.58%	NP_524411.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments