Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AFS44350.1 RNA polymerase beta-subunit [Bradyrhizobium sp. IAR18B] ... Query length: 289 aa

Query: RNA polymerase beta-subunit ...

RNA polymerase beta-subunit [Bradyrhizobium sp. IAR18B]

289 aa protein

accession:AFS44350.1

Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa]

1357 aa protein

accession:WP_003114335.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Shewanella oneidensis]

1345 aa protein

accession:WP_011070610.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]

1342 aa protein

accession:WP_000263098.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Neisseria meningitidis]

1392 aa protein

accession:WP_105182946.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Bacillaceae]

1193 aa protein

accession:WP_009966326.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003114335.1\|	DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa]	313	313	95%	1e-96	54.51%	WP_003114335.1
2 Select seq ref\|WP_011070610.1\|	DNA-directed RNA polymerase subunit beta [Shewanella oneidensis]	311	311	98%	4e-96	51.93%	WP_011070610.1
3 Select seq ref\|WP_105182946.1\|	DNA-directed RNA polymerase subunit beta [Neisseria meningitidis]	305	305	97%	1e-93	51.25%	WP_105182946.1
4 Select seq ref\|WP_000263098.1\|	DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]	290	290	95%	3e-88	51.27%	WP_000263098.1
5 Select seq ref\|WP_009966326.1\|	DNA-directed RNA polymerase subunit beta [Bacillaceae]	193	193	95%	3e-54	40.40%	WP_009966326.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments