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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: AFV52248.1 gag protein [Human immunodeficiency virus 1] ... Query length: 499 aa
Query: gag protein ...
gag protein [Human immunodeficiency virus 1]
499 aa protein
accession:AFV52248.1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
endogenous retrovirus group K member 8 Gag polyprotein-like isoform X2 ...
endogenous retrovirus group K member 8 Gag polyprotein-like isoform X2 [Rattus norvegicus]
300 aa protein
accession:XP_063133761.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
CCHC-type zinc finger, nucleic acid binding protein b ...
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
cold shock domain protein 1 ...
cold shock domain protein 1 [Arabidopsis thaliana]
265 aa protein
accession:NP_001329650.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
86.3 86.3 29% 9e-1731.74% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
80.1 80.1 64% 7e-1525.22% XP_036016771.1
3
endogenous retrovirus group K member 8 Gag polyprotein-like isoform X2 [Rattus norvegicus]
71.2 71.2 42% 1e-1226.55% XP_063133761.1
4
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
52.8 179 10% 3e-0746.51% NP_001313334.1
5
cold shock domain protein 1 [Arabidopsis thaliana]
50.4 209 25% 6e-0630.89% NP_001329650.1