Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AGA80971.1 recombination activating protein 1 [Gymnomystax mexicanus] ... Query length: 961 aa

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase UHRF1 isoform C ...

E3 ubiquitin-protein ligase UHRF1 isoform C [Mus musculus]

780 aa protein

accession:NP_001400286.1

Alignment Sequence Identical proteins

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_009296061.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Gymnomystax mexicanus]

961 aa protein

accession:AGA80971.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]

1043 aa protein

accession:XP_047283340.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047283340.1\|	V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]	1553	1553	100%	0.0	76.22%	XP_047283340.1
2 Select seq ref\|XP_009296061.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	1157	1157	93%	0.0	60.58%	XP_009296061.1
3 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	57.8	57.8	10%	3e-07	31.58%	NP_587701.1
4 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	48.1	48.1	12%	2e-04	31.09%	XP_001351466.1
5 Select seq ref\|NP_001400286.1\|	E3 ubiquitin-protein ligase UHRF1 isoform C [Mus musculus]	47.4	47.4	13%	3e-04	26.47%	NP_001400286.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments