Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AGQ55262.1 rhodopsin [Austrofundulus sp. DMR-2013] ... Query length: 307 aa

rhodopsin 6 ...

rhodopsin 6 [Drosophila melanogaster]

369 aa protein

accession:NP_524368.5

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Rattus norvegicus]

348 aa protein

accession:NP_254276.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Mus musculus]

348 aa protein

accession:NP_663358.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Austrofundulus sp. DMR-2013]

307 aa protein

accession:AGQ55262.1

Sequence Identical proteins

rhodopsin ...

rhodopsin [Danio rerio]

354 aa protein

accession:NP_571159.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_571159.2\|	rhodopsin [Danio rerio]	563	563	100%	0.0	85.67%	NP_571159.2
2 Select seq ref\|NP_254276.1\|	rhodopsin [Rattus norvegicus]	510	510	100%	0.0	78.18%	NP_254276.1
3 Select seq ref\|NP_663358.1\|	rhodopsin [Mus musculus]	509	509	100%	0.0	77.85%	NP_663358.1
4 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	487	487	100%	1e-173	76.22%	NP_000530.1
5 Select seq ref\|NP_524368.5\|	rhodopsin 6 [Drosophila melanogaster]	139	139	92%	6e-37	28.09%	NP_524368.5

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments