Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AHY87792.1 recombination activating protein 1 [Tephrodornis pondicerianus] ... Query length: 488 aa

hypothetical protein DDB_G0278183 ...

hypothetical protein DDB_G0278183 [Dictyostelium discoideum AX4]

601 aa protein

accession:XP_642185.1

Alignment Sequence Identical proteins

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Tephrodornis pondicerianus]

488 aa protein

accession:AHY87792.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_005163033.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	869	869	100%	0.0	82.38%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	865	865	100%	0.0	82.58%	NP_033045.2
3 Select seq ref\|XP_005163033.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	705	705	100%	0.0	66.73%	XP_005163033.1
4 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	54.3	54.3	15%	2e-06	33.70%	NP_587701.1
5 Select seq ref\|XP_642185.1\|	hypothetical protein DDB_G0278183 [Dictyostelium discoideum AX4]	47.4	47.4	15%	3e-04	34.62%	XP_642185.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments