Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIA90416.1 DEAD [uncultured Leishmania] ... Query length: 103 aa

ATP-dependent RNA helicase BRR2 ...

ATP-dependent RNA helicase BRR2 [Saccharomyces cerevisiae S288C]

2163 aa protein

accession:NP_011099.1

Alignment Sequence Identical proteins

Query: DEAD ...

DEAD [uncultured Leishmania]

103 aa protein

accession:AIA90416.1

Sequence Identical proteins

Brr2 U5 snRNP complex subunit ...

Brr2 U5 snRNP complex subunit [Drosophila melanogaster]

2142 aa protein

accession:NP_648818.3

Alignment Sequence Identical proteins

U5 small nuclear ribonucleoprotein 200 kDa helicase ...

U5 small nuclear ribonucleoprotein 200 kDa helicase [Homo sapiens]

2136 aa protein

accession:NP_054733.2

Alignment Sequence Identical proteins

U5 small nuclear ribonucleoprotein 200 kDa helicase ...

U5 small nuclear ribonucleoprotein 200 kDa helicase [Mus musculus]

2136 aa protein

accession:NP_796188.2

Alignment Sequence Identical proteins

U5 small nuclear ribonucleoprotein 200 kDa helicase ...

U5 small nuclear ribonucleoprotein 200 kDa helicase [Caenorhabditis elegans]

2145 aa protein

accession:NP_001366952.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_011099.1\|	ATP-dependent RNA helicase BRR2 [Saccharomyces cerevisiae S288C]	124	124	98%	4e-33	56.31%	NP_011099.1
2 Select seq ref\|NP_648818.3\|	Brr2 U5 snRNP complex subunit [Drosophila melanogaster]	103	146	100%	5e-26	47.57%	NP_648818.3
3 Select seq ref\|NP_054733.2\|	U5 small nuclear ribonucleoprotein 200 kDa helicase [Homo sapiens]	103	155	100%	8e-26	49.51%	NP_054733.2
4 Select seq ref\|NP_796188.2\|	U5 small nuclear ribonucleoprotein 200 kDa helicase [Mus musculus]	103	155	100%	8e-26	49.51%	NP_796188.2
5 Select seq ref\|NP_001366952.1\|	U5 small nuclear ribonucleoprotein 200 kDa helicase [Caenorhabditis elegans]	101	158	97%	4e-25	51.49%	NP_001366952.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments