Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIE17357.1 RNA polymerase subunit B [Acinetobacter sp. LR1] ... Query length: 292 aa

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Bacillaceae]

1193 aa protein

accession:WP_009966326.1

Alignment Sequence Identical proteins

Query: RNA polymerase subunit B ...

RNA polymerase subunit B [Acinetobacter sp. LR1]

292 aa protein

accession:AIE17357.1

Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Neisseria meningitidis]

1392 aa protein

accession:WP_105182946.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]

1342 aa protein

accession:WP_000263098.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Shewanella oneidensis]

1345 aa protein

accession:WP_011070610.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa]

1357 aa protein

accession:WP_003114335.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003114335.1\|	DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa]	387	387	100%	9e-124	63.70%	WP_003114335.1
2 Select seq ref\|WP_000263098.1\|	DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]	321	321	100%	1e-99	56.46%	WP_000263098.1
3 Select seq ref\|WP_105182946.1\|	DNA-directed RNA polymerase subunit beta [Neisseria meningitidis]	318	318	100%	3e-98	54.25%	WP_105182946.1
4 Select seq ref\|WP_011070610.1\|	DNA-directed RNA polymerase subunit beta [Shewanella oneidensis]	298	298	100%	5e-91	54.21%	WP_011070610.1
5 Select seq ref\|WP_009966326.1\|	DNA-directed RNA polymerase subunit beta [Bacillaceae]	176	176	67%	3e-48	46.46%	WP_009966326.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments