Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIE43513.1 rhodopsin [Scolichthys iota] ... Query length: 273 aa

rhodopsin 6 ...

rhodopsin 6 [Drosophila melanogaster]

369 aa protein

accession:NP_524368.5

Alignment Sequence Identical proteins

rhodopsin isoform X1 ...

rhodopsin isoform X1 [Mus musculus]

344 aa protein

accession:XP_006505923.1

Alignment Sequence Identical proteins

rhodopsin isoform X2 ...

rhodopsin isoform X2 [Mus musculus]

338 aa protein

accession:XP_006505924.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Scolichthys iota]

273 aa protein

accession:AIE43513.1

Sequence Identical proteins

rhodopsin, like ...

rhodopsin, like [Danio rerio]

355 aa protein

accession:NP_001103501.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_006505923.1\|	rhodopsin isoform X1 [Mus musculus]	464	464	99%	6e-165	79.78%	XP_006505923.1
2 Select seq ref\|NP_001103501.1\|	rhodopsin, like [Danio rerio]	445	445	99%	1e-157	77.21%	NP_001103501.1
3 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	438	438	99%	7e-155	77.94%	NP_000530.1
4 Select seq ref\|NP_524368.5\|	rhodopsin 6 [Drosophila melanogaster]	131	131	100%	2e-34	26.83%	NP_524368.5
5 Select seq ref\|XP_006505924.1\|	rhodopsin isoform X2 [Mus musculus]	463	463	99%	1e-164	79.78%	XP_006505924.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments