Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIE96854.1 hypothetical conserved protein (RTCB, rtcB) [uncultured marine thaumarchaeote AD1000_88_A06] ... Query length: 424 aa

RtcB family protein ...

RtcB family protein [Sulfolobus acidocaldarius]

482 aa protein

accession:WP_011278155.1

Alignment Sequence Identical proteins

Query: hypothetical conserved protein (RTCB, rtcB) ...

hypothetical conserved protein (RTCB, rtcB) [uncultured marine thaumarchaeote AD1000_88_A06]

424 aa protein

accession:AIE96854.1

Sequence Identical proteins

RNA-splicing ligase RtcB ...

RNA-splicing ligase RtcB [Methanothermobacter thermautotrophicus]

482 aa protein

accession:WP_048061099.1

Alignment Sequence Identical proteins

UPF0027 family protein ...

UPF0027 family protein [Dictyostelium discoideum AX4]

508 aa protein

accession:XP_642393.1

Alignment Sequence Identical proteins

RNA-splicing ligase RtcB homolog ...

RNA-splicing ligase RtcB homolog [Danio rerio]

505 aa protein

accession:NP_998268.1

Alignment Sequence Identical proteins

uncharacterized protein PF3D7_1105700 ...

uncharacterized protein PF3D7_1105700 [Plasmodium falciparum 3D7]

506 aa protein

accession:XP_001347744.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_011278155.1\|	RtcB family protein [Sulfolobus acidocaldarius]	479	479	97%	3e-166	54.78%	WP_011278155.1
2 Select seq ref\|WP_048061099.1\|	RNA-splicing ligase RtcB [Methanothermobacter thermautotrophicus]	468	468	98%	6e-162	55.29%	WP_048061099.1
3 Select seq ref\|XP_642393.1\|	UPF0027 family protein [Dictyostelium discoideum AX4]	422	422	91%	1e-143	51.40%	XP_642393.1
4 Select seq ref\|XP_001347744.1\|	uncharacterized protein PF3D7_1105700 [Plasmodium falciparum 3D7]	421	421	98%	2e-143	49.08%	XP_001347744.1
5 Select seq ref\|NP_998268.1\|	RNA-splicing ligase RtcB homolog [Danio rerio]	415	415	90%	4e-141	51.94%	NP_998268.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments