Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AIF02643.1
regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_158_C07]
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Query length:
671 aa
DOMAINS: and other(s) domains
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Query: regulator of nonsense transcripts 1 (UPF1, RENT1)
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regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_158_C07]
671 aa protein
accession:AIF02643.1
regulator of nonsense transcripts 1 isoform 2
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regulator of nonsense transcripts 1 isoform 2 [Homo sapiens]
1118 aa protein
accession:NP_002902.2
regulator of nonsense transcripts 1 isoform b
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regulator of nonsense transcripts 1 isoform b [Mus musculus]
1113 aa protein
accession:NP_109605.2
regulator of nonsense transcripts 1
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regulator of nonsense transcripts 1 [Danio rerio]
1100 aa protein
accession:NP_998639.1
Upf1 RNA helicase, isoform B
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Upf1 RNA helicase, isoform B [Drosophila melanogaster]
1180 aa protein
accession:NP_001285145.1
regulator of nonsense transcripts 1 homolog
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regulator of nonsense transcripts 1 homolog [Glycine max]
1268 aa protein
accession:XP_006590595.1
DOMAINS: and other(s) domains
...
regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_158_C07]
671 aa protein
accession:AIF02643.1
regulator of nonsense transcripts 1 isoform 2 [Homo sapiens]
1118 aa protein
accession:NP_002902.2
regulator of nonsense transcripts 1 isoform b [Mus musculus]
1113 aa protein
accession:NP_109605.2
regulator of nonsense transcripts 1 [Danio rerio]
1100 aa protein
accession:NP_998639.1
Upf1 RNA helicase, isoform B [Drosophila melanogaster]
1180 aa protein
accession:NP_001285145.1
regulator of nonsense transcripts 1 homolog [Glycine max]
1268 aa protein
accession:XP_006590595.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 329 | 329 | 76% | 2e-98 | 38.06% | NP_002902.2 | |
| 2 | 328 | 328 | 76% | 4e-98 | 38.13% | NP_109605.2 | |
| 3 | 327 | 327 | 75% | 8e-98 | 38.33% | NP_998639.1 | |
| 4 | 316 | 316 | 76% | 4e-93 | 37.79% | NP_001285145.1 | |
| 5 | 310 | 310 | 75% | 2e-90 | 36.65% | XP_006590595.1 |