Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AIF05910.1
DNA-directed RNA polymerase subunit N (rpoN) [uncultured marine thaumarchaeote KM3_188_F10]
...
Query length:
78 aa
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I, II, and III subunit RPABC5
...
DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Caenorhabditis elegans]
67 aa protein
accession:NP_490923.1
DNA-directed RNA polymerases I, II, and III subunit RPABC5
...
DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Danio rerio]
67 aa protein
accession:NP_001153297.1
DNA-directed RNA polymerases I, II, and III subunit RPABC5
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DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Homo sapiens]
67 aa protein
accession:NP_066951.1
DNA-directed RNA polymerase subunit N
...
DNA-directed RNA polymerase subunit N [Sulfolobus acidocaldarius]
66 aa protein
accession:WP_011277015.1
Query: DNA-directed RNA polymerase subunit N (rpoN)
...
DNA-directed RNA polymerase subunit N (rpoN) [uncultured marine thaumarchaeote KM3_188_F10]
78 aa protein
accession:AIF05910.1
DNA-directed RNA polymerase subunit N
...
DNA-directed RNA polymerase subunit N [Methanothermobacter]
55 aa protein
accession:WP_010875681.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Caenorhabditis elegans]
67 aa protein
accession:NP_490923.1
DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Danio rerio]
67 aa protein
accession:NP_001153297.1
DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Homo sapiens]
67 aa protein
accession:NP_066951.1
DNA-directed RNA polymerase subunit N [Sulfolobus acidocaldarius]
66 aa protein
accession:WP_011277015.1
DNA-directed RNA polymerase subunit N (rpoN) [uncultured marine thaumarchaeote KM3_188_F10]
78 aa protein
accession:AIF05910.1
DNA-directed RNA polymerase subunit N [Methanothermobacter]
55 aa protein
accession:WP_010875681.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 85.9 | 85.9 | 79% | 7e-23 | 51.61% | WP_011277015.1 | |
| 2 | 77.4 | 77.4 | 69% | 1e-19 | 59.26% | WP_010875681.1 | |
| 3 | 74.3 | 74.3 | 80% | 3e-18 | 46.03% | NP_490923.1 | |
| 4 | 73.6 | 73.6 | 79% | 5e-18 | 48.39% | NP_001153297.1 | |
| 5 | 73.2 | 73.2 | 79% | 7e-18 | 48.39% | NP_066951.1 |