Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AIF10604.1
ATPase central domain-containing protein (rfcL) [uncultured marine thaumarchaeote KM3_46_G10]
...
Query length:
385 aa
DOMAINS: and other(s) domains
...
replication factor C subunit
...
replication factor C subunit [Dictyostelium discoideum AX4]
1401 aa protein
accession:XP_638011.1
replication factor C subunit 1
...
replication factor C subunit 1 [Saccharomyces cerevisiae S288C]
861 aa protein
accession:NP_014860.1
germ line transcription factor 1, isoform A
...
germ line transcription factor 1, isoform A [Drosophila melanogaster]
986 aa protein
accession:NP_524229.1
Query: ATPase central domain-containing protein (rfcL)
...
ATPase central domain-containing protein (rfcL) [uncultured marine thaumarchaeote KM3_46_G10]
385 aa protein
accession:AIF10604.1
replication factor C large subunit
...
replication factor C large subunit [Methanothermobacter]
479 aa protein
accession:WP_010875879.1
replication factor C large subunit
...
replication factor C large subunit [Sulfolobus acidocaldarius]
437 aa protein
accession:WP_011277771.1
DOMAINS: and other(s) domains
...
replication factor C subunit [Dictyostelium discoideum AX4]
1401 aa protein
accession:XP_638011.1
replication factor C subunit 1 [Saccharomyces cerevisiae S288C]
861 aa protein
accession:NP_014860.1
germ line transcription factor 1, isoform A [Drosophila melanogaster]
986 aa protein
accession:NP_524229.1
ATPase central domain-containing protein (rfcL) [uncultured marine thaumarchaeote KM3_46_G10]
385 aa protein
accession:AIF10604.1
replication factor C large subunit [Methanothermobacter]
479 aa protein
accession:WP_010875879.1
replication factor C large subunit [Sulfolobus acidocaldarius]
437 aa protein
accession:WP_011277771.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 175 | 175 | 100% | 9e-49 | 29.25% | WP_010875879.1 | |
| 2 | 122 | 122 | 76% | 2e-29 | 25.65% | WP_011277771.1 | |
| 3 | 113 | 113 | 75% | 1e-25 | 27.86% | XP_638011.1 | |
| 4 | 112 | 112 | 50% | 1e-25 | 30.80% | NP_014860.1 | |
| 5 | 112 | 112 | 57% | 2e-25 | 29.18% | NP_524229.1 |