Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIF12474.1 ATPase central domain-containing protein (rfcL) [uncultured marine thaumarchaeote KM3_55_H11] ... Query length: 365 aa

Query: ATPase central domain-containing protein (rfcL) ...

ATPase central domain-containing protein (rfcL) [uncultured marine thaumarchaeote KM3_55_H11]

365 aa protein

accession:AIF12474.1

Sequence Identical proteins

replication factor C large subunit ...

replication factor C large subunit [Methanothermobacter]

479 aa protein

accession:WP_010875879.1

Alignment Sequence Identical proteins

replication factor C large subunit ...

replication factor C large subunit [Sulfolobus acidocaldarius]

437 aa protein

accession:WP_011277771.1

Alignment Sequence Identical proteins

replication factor C subunit 1, putative ...

replication factor C subunit 1, putative [Plasmodium falciparum 3D7]

904 aa protein

accession:XP_001349697.1

Alignment Sequence Identical proteins

replication factor C subunit 1 ...

replication factor C subunit 1 [Saccharomyces cerevisiae S288C]

861 aa protein

accession:NP_014860.1

Alignment Sequence Identical proteins

replication factor C subunit 1 ...

replication factor C subunit 1 [Danio rerio]

1147 aa protein

accession:NP_001082960.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_010875879.1\|	replication factor C large subunit [Methanothermobacter]	179	179	99%	7e-51	29.89%	WP_010875879.1
2 Select seq ref\|WP_011277771.1\|	replication factor C large subunit [Sulfolobus acidocaldarius]	143	143	97%	6e-38	26.32%	WP_011277771.1
3 Select seq ref\|XP_001349697.1\|	replication factor C subunit 1, putative [Plasmodium falciparum 3D7]	115	115	61%	3e-27	31.20%	XP_001349697.1
4 Select seq ref\|NP_014860.1\|	replication factor C subunit 1 [Saccharomyces cerevisiae S288C]	115	115	53%	5e-27	32.00%	NP_014860.1
5 Select seq ref\|NP_001082960.2\|	replication factor C subunit 1 [Danio rerio]	108	108	53%	9e-25	27.47%	NP_001082960.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments