Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIQ85117.1 envelope protein syncytin-Ten1 [Setifer setosus] ... Query length: 508 aa

uncharacterized protein LOC110439162 ...

uncharacterized protein LOC110439162 [Danio rerio]

468 aa protein

accession:XP_021329719.1

Alignment Sequence Identical proteins

syncytin-A precursor ...

syncytin-A precursor [Mus musculus]

617 aa protein

accession:NP_001013773.1

Alignment Sequence Identical proteins

syncytin-1 precursor ...

syncytin-1 precursor [Homo sapiens]

538 aa protein

accession:NP_001124397.1

Alignment Sequence Identical proteins

Query: envelope protein syncytin-Ten1 ...

envelope protein syncytin-Ten1 [Setifer setosus]

508 aa protein

accession:AIQ85117.1

Sequence Identical proteins

endogenous retrovirus group V member 2 Env polyprotein precursor ...

endogenous retrovirus group V member 2 Env polyprotein precursor [Homo sapiens]

535 aa protein

accession:NP_001177984.1

Alignment Sequence Identical proteins

endogenous retrovirus group V member 1 Env polyprotein precursor ...

endogenous retrovirus group V member 1 Env polyprotein precursor [Homo sapiens]

477 aa protein

accession:NP_689686.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001177984.1\|	endogenous retrovirus group V member 2 Env polyprotein precursor [Homo sapiens]	267	267	94%	9e-82	35.40%	NP_001177984.1
2 Select seq ref\|NP_001013773.1\|	syncytin-A precursor [Mus musculus]	96.7	96.7	33%	8e-20	38.24%	NP_001013773.1
3 Select seq ref\|XP_021329719.1\|	uncharacterized protein LOC110439162 [Danio rerio]	63.2	63.2	25%	3e-09	26.47%	XP_021329719.1
4 Select seq ref\|NP_689686.2\|	endogenous retrovirus group V member 1 Env polyprotein precursor [Homo sapiens]	234	234	89%	7e-70	33.26%	NP_689686.2
5 Select seq ref\|NP_001124397.1\|	syncytin-1 precursor [Homo sapiens]	107	107	52%	3e-23	31.21%	NP_001124397.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments