Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AKQ05170.1
DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha [uncultured Chloroflexi bacterium Rifle_16ft_4_minimus_26684]
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Query length:
271 aa
DOMAINS: and other(s) domains
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Query: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha
...
DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha [uncultured Chloroflexi bacterium Rifle_16ft_4_minimus_26684]
271 aa protein
accession:AKQ05170.1
DNA-directed RNA polymerase subunit alpha
...
DNA-directed RNA polymerase subunit alpha [Bacillales]
314 aa protein
accession:WP_003225835.1
DNA-directed RNA polymerase subunit alpha
...
DNA-directed RNA polymerase subunit alpha [Clostridioides difficile]
315 aa protein
accession:WP_003427733.1
DNA-directed RNA polymerase subunit alpha
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DNA-directed RNA polymerase subunit alpha [Streptococcus]
311 aa protein
accession:WP_000568988.1
DNA-directed RNA polymerase subunit alpha
...
DNA-directed RNA polymerase subunit alpha [Mycobacterium]
347 aa protein
accession:WP_003418351.1
DNA-directed RNA polymerase subunit alpha
...
DNA-directed RNA polymerase subunit alpha [Thermotoga maritima]
336 aa protein
accession:WP_004081779.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha [uncultured Chloroflexi bacterium Rifle_16ft_4_minimus_26684]
271 aa protein
accession:AKQ05170.1
DNA-directed RNA polymerase subunit alpha [Bacillales]
314 aa protein
accession:WP_003225835.1
DNA-directed RNA polymerase subunit alpha [Clostridioides difficile]
315 aa protein
accession:WP_003427733.1
DNA-directed RNA polymerase subunit alpha [Streptococcus]
311 aa protein
accession:WP_000568988.1
DNA-directed RNA polymerase subunit alpha [Mycobacterium]
347 aa protein
accession:WP_003418351.1
DNA-directed RNA polymerase subunit alpha [Thermotoga maritima]
336 aa protein
accession:WP_004081779.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 236 | 236 | 96% | 1e-75 | 44.81% | WP_003225835.1 | |
| 2 | 231 | 231 | 92% | 1e-73 | 46.30% | WP_003427733.1 | |
| 3 | 226 | 226 | 96% | 4e-72 | 45.45% | WP_000568988.1 | |
| 4 | 196 | 196 | 96% | 1e-59 | 40.07% | WP_003418351.1 | |
| 5 | 193 | 193 | 92% | 7e-59 | 39.11% | WP_004081779.1 |