Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ALA14990.1 DNA mismatch repair system Msh2 [Paramecium schewiakoffi] ... Query length: 131 aa

Query: DNA mismatch repair system Msh2 ...

DNA mismatch repair system Msh2 [Paramecium schewiakoffi]

131 aa protein

accession:ALA14990.1

Sequence Identical proteins

DNA mismatch repair protein Msh2 ...

DNA mismatch repair protein Msh2 [Mus musculus]

935 aa protein

accession:NP_032654.1

Alignment Sequence Identical proteins

DNA mismatch repair protein Msh2 isoform 28 ...

DNA mismatch repair protein Msh2 isoform 28 [Homo sapiens]

474 aa protein

accession:NP_001393595.1

Alignment Sequence Identical proteins

DNA mismatch repair protein Msh2 isoform 24 ...

DNA mismatch repair protein Msh2 isoform 24 [Homo sapiens]

679 aa protein

accession:NP_001393584.1

Alignment Sequence Identical proteins

DNA mismatch repair protein Msh2 isoform 4 ...

DNA mismatch repair protein Msh2 isoform 4 [Homo sapiens]

976 aa protein

accession:NP_001393561.1

Alignment Sequence Identical proteins

hypothetical protein DDB_G0275809 ...

hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]

937 aa protein

accession:XP_643399.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_032654.1\|	DNA mismatch repair protein Msh2 [Mus musculus]	51.6	51.6	71%	3e-07	27.45%	NP_032654.1
2 Select seq ref\|NP_001393595.1\|	DNA mismatch repair protein Msh2 isoform 28 [Homo sapiens]	51.2	51.2	77%	3e-07	27.52%	NP_001393595.1
3 Select seq ref\|XP_643399.1\|	hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]	38.5	38.5	71%	0.009	27.08%	XP_643399.1
4 Select seq ref\|NP_001393584.1\|	DNA mismatch repair protein Msh2 isoform 24 [Homo sapiens]	51.2	51.2	77%	4e-07	27.52%	NP_001393584.1
5 Select seq ref\|NP_001393561.1\|	DNA mismatch repair protein Msh2 isoform 4 [Homo sapiens]	51.2	51.2	77%	4e-07	27.52%	NP_001393561.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments