Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AQQ74171.1 rhodopsin [Lipogramma sp. 2 LT-2017] ... Query length: 246 aa

rhodopsin 6 ...

rhodopsin 6 [Drosophila melanogaster]

369 aa protein

accession:NP_524368.5

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Lipogramma sp. 2 LT-2017]

246 aa protein

accession:AQQ74171.1

Sequence Identical proteins

rhodopsin isoform X3 ...

rhodopsin isoform X3 [Mus musculus]

310 aa protein

accession:XP_017176982.1

Alignment Sequence Identical proteins

rhodopsin isoform X1 ...

rhodopsin isoform X1 [Mus musculus]

344 aa protein

accession:XP_006505923.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

rhodopsin, like ...

rhodopsin, like [Danio rerio]

355 aa protein

accession:NP_001103501.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_017176982.1\|	rhodopsin isoform X3 [Mus musculus]	429	429	100%	3e-152	80.08%	XP_017176982.1
2 Select seq ref\|NP_001103501.1\|	rhodopsin, like [Danio rerio]	422	422	100%	7e-149	78.86%	NP_001103501.1
3 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	406	406	100%	9e-143	78.86%	NP_000530.1
4 Select seq ref\|NP_524368.5\|	rhodopsin 6 [Drosophila melanogaster]	122	122	99%	2e-31	27.80%	NP_524368.5
5 Select seq ref\|XP_006505923.1\|	rhodopsin isoform X1 [Mus musculus]	428	428	100%	2e-151	80.08%	XP_006505923.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments