Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AQY77196.1 UBD [Homo sapiens] ... Query length: 165 aa

polyubiquitin ...

polyubiquitin [Plasmodium falciparum 3D7]

381 aa protein

accession:XP_001350526.1

Alignment Sequence Identical proteins

ubiquitin 11 ...

ubiquitin 11 [Arabidopsis thaliana]

153 aa protein

accession:NP_001190681.1

Alignment Sequence Identical proteins

ubiquitin D ...

ubiquitin D [Rattus norvegicus]

161 aa protein

accession:NP_445751.2

Alignment Sequence Identical proteins

ubiquitin D ...

ubiquitin D [Mus musculus]

162 aa protein

accession:NP_075626.1

Alignment Sequence Identical proteins

Query: UBD ...

UBD [Homo sapiens]

165 aa protein

accession:AQY77196.1

Sequence Identical proteins

ubiquitin D ...

ubiquitin D [Homo sapiens]

165 aa protein

accession:NP_006389.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_006389.2\|	ubiquitin D [Homo sapiens]	337	337	100%	3e-119	98.79%	NP_006389.2
2 Select seq ref\|NP_445751.2\|	ubiquitin D [Rattus norvegicus]	244	244	97%	1e-82	73.91%	NP_445751.2
3 Select seq ref\|NP_075626.1\|	ubiquitin D [Mus musculus]	237	237	100%	6e-80	69.09%	NP_075626.1
4 Select seq ref\|XP_001350526.1\|	polyubiquitin [Plasmodium falciparum 3D7]	80.5	209	95%	5e-17	31.65%	XP_001350526.1
5 Select seq ref\|NP_001190681.1\|	ubiquitin 11 [Arabidopsis thaliana]	76.3	76.3	95%	9e-17	30.38%	NP_001190681.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments