Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AXP98717.1 recombination activating protein 1 [Holochilus chacarius] ... Query length: 421 aa

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

uncharacterized protein Dmel_CG9014, isoform B ...

uncharacterized protein Dmel_CG9014, isoform B [Drosophila melanogaster]

328 aa protein

accession:NP_001285905.1

Alignment Sequence Identical proteins

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Holochilus chacarius]

421 aa protein

accession:AXP98717.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]

1043 aa protein

accession:XP_047283340.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_009296061.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047283340.1\|	V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]	719	719	100%	0.0	82.27%	XP_047283340.1
2 Select seq ref\|XP_009296061.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	303	303	88%	2e-92	39.40%	XP_009296061.1
3 Select seq ref\|NP_001285905.1\|	uncharacterized protein Dmel_CG9014, isoform B [Drosophila melanogaster]	53.9	53.9	33%	5e-07	27.97%	NP_001285905.1
4 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	52.0	52.0	19%	4e-06	30.59%	NP_587701.1
5 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	49.3	49.3	20%	3e-05	35.48%	XP_001351466.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments