Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AYG97579.1 recombination activating protein 1 [Caledoniscincus haplorhinus] ... Query length: 279 aa

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_009296061.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]

1043 aa protein

accession:XP_047283340.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Caledoniscincus haplorhinus]

279 aa protein

accession:AYG97579.1

Sequence Identical proteins

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF138 isoform X2 ...

E3 ubiquitin-protein ligase RNF138 isoform X2 [Rattus norvegicus]

209 aa protein

accession:XP_038953129.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047283340.1\|	V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]	408	408	100%	1e-134	65.48%	XP_047283340.1
2 Select seq ref\|XP_009296061.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	172	172	98%	1e-47	32.21%	XP_009296061.1
3 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	58.5	58.5	48%	1e-08	30.37%	XP_001351466.1
4 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	48.1	48.1	18%	3e-05	36.84%	NP_587701.1
5 Select seq ref\|XP_038953129.1\|	E3 ubiquitin-protein ligase RNF138 isoform X2 [Rattus norvegicus]	45.8	45.8	32%	6e-05	30.53%	XP_038953129.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments