Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BBN91617.1
MHC class II antigen beta [Rhodeus atremius suigensis]
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Query length:
92 aa
DOMAINS: and other(s) domains
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H-2 class II histocompatibility antigen, I-E beta chain precursor
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H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]
264 aa protein
accession:NP_034512.2
major histocompatibility complex, class II, DR beta 3 precursor
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major histocompatibility complex, class II, DR beta 3 precursor [Homo sapiens]
266 aa protein
accession:NP_072049.2
major histocompatibility complex class II DGB precursor
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major histocompatibility complex class II DGB precursor [Danio rerio]
252 aa protein
accession:NP_001007207.2
Query: MHC class II antigen beta
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MHC class II antigen beta [Rhodeus atremius suigensis]
92 aa protein
accession:BBN91617.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X1
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H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X2
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H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
DOMAINS: and other(s) domains
...
H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]
264 aa protein
accession:NP_034512.2
major histocompatibility complex, class II, DR beta 3 precursor [Homo sapiens]
266 aa protein
accession:NP_072049.2
major histocompatibility complex class II DGB precursor [Danio rerio]
252 aa protein
accession:NP_001007207.2
MHC class II antigen beta [Rhodeus atremius suigensis]
92 aa protein
accession:BBN91617.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 108 | 108 | 98% | 3e-29 | 54.95% | XP_005168179.1 | |
| 2 | 54.7 | 54.7 | 66% | 7e-09 | 40.98% | NP_034512.2 | |
| 3 | 52.0 | 52.0 | 68% | 5e-08 | 36.51% | NP_072049.2 | |
| 4 | 108 | 108 | 98% | 3e-29 | 54.95% | XP_002661942.3 | |
| 5 | 104 | 104 | 98% | 6e-28 | 53.85% | NP_001007207.2 |