Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BBN91618.1
MHC class II antigen beta [Rhodeus atremius atremius]
...
Query length:
92 aa
DOMAINS: and other(s) domains
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HLA class II histocompatibility antigen, DP beta 1 chain precursor
...
HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
histocompatibility 2, class II antigen A, beta 1 precursor
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histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
rano class II histocompatibility antigen, D-1 beta chain isoform X1
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rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X2
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H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
Query: MHC class II antigen beta
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MHC class II antigen beta [Rhodeus atremius atremius]
92 aa protein
accession:BBN91618.1
major histocompatibility complex class II DGB precursor
...
major histocompatibility complex class II DGB precursor [Danio rerio]
252 aa protein
accession:NP_001007207.2
DOMAINS: and other(s) domains
...
HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
MHC class II antigen beta [Rhodeus atremius atremius]
92 aa protein
accession:BBN91618.1
major histocompatibility complex class II DGB precursor [Danio rerio]
252 aa protein
accession:NP_001007207.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 105 | 105 | 98% | 3e-28 | 52.75% | NP_001007207.2 | |
| 2 | 61.2 | 61.2 | 65% | 2e-11 | 43.33% | NP_002112.3 | |
| 3 | 59.7 | 59.7 | 64% | 8e-11 | 40.68% | NP_996988.2 | |
| 4 | 54.7 | 54.7 | 70% | 7e-09 | 33.85% | XP_063135086.1 | |
| 5 | 103 | 103 | 100% | 1e-27 | 55.43% | XP_002661942.3 |