Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BBN91619.1
MHC class II antigen beta [Rhodeus atremius atremius]
...
Query length:
92 aa
DOMAINS: and other(s) domains
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major histocompatibility complex, class II, DR beta 1 precursor
...
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
H-2 class II histocompatibility antigen, I-E beta chain precursor
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H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]
264 aa protein
accession:NP_034512.2
rano class II histocompatibility antigen, D-1 beta chain isoform X1
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rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
Query: MHC class II antigen beta
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MHC class II antigen beta [Rhodeus atremius atremius]
92 aa protein
accession:BBN91619.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X1
...
H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X2
...
H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
DOMAINS: and other(s) domains
...
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]
264 aa protein
accession:NP_034512.2
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
MHC class II antigen beta [Rhodeus atremius atremius]
92 aa protein
accession:BBN91619.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 112 | 112 | 100% | 6e-31 | 58.70% | XP_005168179.1 | |
| 2 | 63.5 | 63.5 | 68% | 3e-12 | 42.86% | NP_002115.2 | |
| 3 | 61.2 | 61.2 | 65% | 3e-11 | 43.33% | NP_034512.2 | |
| 4 | 55.8 | 55.8 | 70% | 2e-09 | 36.92% | XP_063135086.1 | |
| 5 | 112 | 112 | 100% | 6e-31 | 58.70% | XP_002661942.3 |