Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BDP27726.1
MHC class II antigen [Nyctereutes procyonoides]
...
Query length:
79 aa
DOMAINS: and other(s) domains
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histocompatibility 2, class II antigen A, beta 1 precursor
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histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
Query: MHC class II antigen
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MHC class II antigen [Nyctereutes procyonoides]
79 aa protein
accession:BDP27726.1
major histocompatibility complex, class II, DR beta 1 precursor
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major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
major histocompatibility complex, class II, DR beta 1 precursor
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major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_001346123.1
major histocompatibility complex, class II, DR beta 5 precursor
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major histocompatibility complex, class II, DR beta 5 precursor [Homo sapiens]
266 aa protein
accession:NP_002116.2
rano class II histocompatibility antigen, D-1 beta chain precursor
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rano class II histocompatibility antigen, D-1 beta chain precursor [Rattus norvegicus]
264 aa protein
accession:NP_001008884.1
DOMAINS: and other(s) domains
...
histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
MHC class II antigen [Nyctereutes procyonoides]
79 aa protein
accession:BDP27726.1
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_001346123.1
major histocompatibility complex, class II, DR beta 5 precursor [Homo sapiens]
266 aa protein
accession:NP_002116.2
rano class II histocompatibility antigen, D-1 beta chain precursor [Rattus norvegicus]
264 aa protein
accession:NP_001008884.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 137 | 137 | 93% | 1e-40 | 82.43% | NP_002115.2 | |
| 2 | 127 | 127 | 89% | 8e-37 | 80.28% | NP_996988.2 | |
| 3 | 120 | 120 | 100% | 6e-34 | 73.42% | NP_001008884.1 | |
| 4 | 134 | 134 | 98% | 2e-39 | 79.49% | NP_001346123.1 | |
| 5 | 131 | 131 | 100% | 2e-38 | 78.48% | NP_002116.2 |