Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BDP27727.1
MHC class II antigen [Nyctereutes procyonoides]
...
Query length:
79 aa
DOMAINS: and other(s) domains
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major histocompatibility complex class II DAB precursor
...
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
major histocompatibility complex, class II, DR beta 1 precursor
...
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_001346123.1
major histocompatibility complex, class II, DR beta 4 precursor
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major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]
266 aa protein
accession:NP_068818.4
major histocompatibility complex, class II, DR beta 3 precursor
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major histocompatibility complex, class II, DR beta 3 precursor [Homo sapiens]
266 aa protein
accession:NP_072049.2
Query: MHC class II antigen
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MHC class II antigen [Nyctereutes procyonoides]
79 aa protein
accession:BDP27727.1
rano class II histocompatibility antigen, D-1 beta chain isoform X1
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rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
DOMAINS: and other(s) domains
...
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_001346123.1
major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]
266 aa protein
accession:NP_068818.4
major histocompatibility complex, class II, DR beta 3 precursor [Homo sapiens]
266 aa protein
accession:NP_072049.2
MHC class II antigen [Nyctereutes procyonoides]
79 aa protein
accession:BDP27727.1
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 132 | 132 | 98% | 3e-39 | 78.21% | NP_001346123.1 | |
| 2 | 120 | 120 | 100% | 2e-34 | 73.42% | XP_063135086.1 | |
| 3 | 50.4 | 50.4 | 93% | 5e-08 | 36.00% | NP_571551.3 | |
| 4 | 128 | 128 | 100% | 1e-37 | 73.42% | NP_072049.2 | |
| 5 | 127 | 127 | 98% | 2e-37 | 73.08% | NP_068818.4 |