Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
CAA18171.1
putative protein [Arabidopsis thaliana]
...
Query length:
210 aa
DOMAINS: and other(s) domains
...
cleavage and polyadenylation specificity factor subunit 5
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cleavage and polyadenylation specificity factor subunit 5 [Homo sapiens]
227 aa protein
accession:NP_008937.1
cleavage and polyadenylation specificity factor subunit 5
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cleavage and polyadenylation specificity factor subunit 5 [Rattus norvegicus]
227 aa protein
accession:NP_001034093.1
cleavage and polyadenylation specificity factor subunit 5
...
cleavage and polyadenylation specificity factor subunit 5 [Danio rerio]
228 aa protein
accession:NP_957411.1
Pre-mRNA cleavage factor Im 25 kDa subunit 2-like
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Pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Glycine max]
200 aa protein
accession:NP_001237041.1
Query: putative protein
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putative protein [Arabidopsis thaliana]
210 aa protein
accession:CAA18171.1
Cleavage/polyadenylation specificity factor, 25kDa subunit
...
Cleavage/polyadenylation specificity factor, 25kDa subunit [Arabidopsis thaliana]
200 aa protein
accession:NP_194285.2
DOMAINS: and other(s) domains
...
cleavage and polyadenylation specificity factor subunit 5 [Homo sapiens]
227 aa protein
accession:NP_008937.1
cleavage and polyadenylation specificity factor subunit 5 [Rattus norvegicus]
227 aa protein
accession:NP_001034093.1
cleavage and polyadenylation specificity factor subunit 5 [Danio rerio]
228 aa protein
accession:NP_957411.1
Pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Glycine max]
200 aa protein
accession:NP_001237041.1
putative protein [Arabidopsis thaliana]
210 aa protein
accession:CAA18171.1
Cleavage/polyadenylation specificity factor, 25kDa subunit [Arabidopsis thaliana]
200 aa protein
accession:NP_194285.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 354 | 354 | 94% | 5e-125 | 89.39% | NP_194285.2 | |
| 2 | 327 | 327 | 94% | 3e-114 | 80.30% | NP_001237041.1 | |
| 3 | 207 | 207 | 93% | 1e-66 | 52.28% | NP_008937.1 | |
| 4 | 207 | 207 | 93% | 1e-66 | 52.28% | NP_001034093.1 | |
| 5 | 205 | 205 | 93% | 8e-66 | 51.78% | NP_957411.1 |