Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
CAC8953295.1
MHC class II antigen [Homo sapiens]
...
Query length:
261 aa
DOMAINS: and other(s) domains
...
major histocompatibility complex class II DAB precursor
...
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
rano class II histocompatibility antigen, D-1 beta chain isoform X1
...
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2
...
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens]
256 aa protein
accession:XP_054184472.1
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X6
...
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X6 [Homo sapiens]
260 aa protein
accession:XP_054186267.1
Query: MHC class II antigen
...
MHC class II antigen [Homo sapiens]
261 aa protein
accession:CAC8953295.1
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor
...
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
DOMAINS: and other(s) domains
...
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X2 [Homo sapiens]
256 aa protein
accession:XP_054184472.1
HLA class II histocompatibility antigen, DQ beta 2 chain isoform X6 [Homo sapiens]
260 aa protein
accession:XP_054186267.1
MHC class II antigen [Homo sapiens]
261 aa protein
accession:CAC8953295.1
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 447 | 447 | 100% | 4e-160 | 86.59% | NP_001230891.1 | |
| 2 | 311 | 311 | 94% | 4e-106 | 63.97% | XP_063135086.1 | |
| 3 | 134 | 134 | 84% | 2e-37 | 34.68% | NP_571551.3 | |
| 4 | 394 | 394 | 98% | 3e-139 | 79.69% | XP_054184472.1 | |
| 5 | 387 | 387 | 100% | 2e-136 | 80.08% | XP_054186267.1 |