Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CAG33715.1 NR1D2 [Homo sapiens] ... Query length: 579 aa

oxysterols receptor LXR-alpha isoform X1 ...

oxysterols receptor LXR-alpha isoform X1 [Rattus norvegicus]

445 aa protein

accession:XP_063140496.1

Alignment Sequence Identical proteins

Ecdysone-induced protein 75B, isoform G ...

Ecdysone-induced protein 75B, isoform G [Drosophila melanogaster]

991 aa protein

accession:NP_001303380.1

Alignment Sequence Identical proteins

nuclear receptor ROR-alpha isoform X4 ...

nuclear receptor ROR-alpha isoform X4 [Homo sapiens]

386 aa protein

accession:XP_047288884.1

Alignment Sequence Identical proteins

nuclear receptor subfamily 1 group D member 2b isoform X1 ...

nuclear receptor subfamily 1 group D member 2b isoform X1 [Danio rerio]

498 aa protein

accession:XP_005159557.1

Alignment Sequence Identical proteins

Query: NR1D2 ...

NR1D2 [Homo sapiens]

579 aa protein

accession:CAG33715.1

Sequence Identical proteins

nuclear receptor subfamily 1 group D member 2 isoform 3 ...

nuclear receptor subfamily 1 group D member 2 isoform 3 [Mus musculus]

575 aa protein

accession:NP_001412824.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001412824.1\|	nuclear receptor subfamily 1 group D member 2 isoform 3 [Mus musculus]	1036	1036	100%	0.0	90.67%	NP_001412824.1
2 Select seq ref\|XP_005159557.1\|	nuclear receptor subfamily 1 group D member 2b isoform X1 [Danio rerio]	499	499	79%	4e-172	57.80%	XP_005159557.1
3 Select seq ref\|NP_001303380.1\|	Ecdysone-induced protein 75B, isoform G [Drosophila melanogaster]	179	323	51%	7e-47	70.19%	NP_001303380.1
4 Select seq ref\|XP_047288884.1\|	nuclear receptor ROR-alpha isoform X4 [Homo sapiens]	146	146	30%	8e-38	42.78%	XP_047288884.1
5 Select seq ref\|XP_063140496.1\|	oxysterols receptor LXR-alpha isoform X1 [Rattus norvegicus]	133	219	48%	8e-33	33.50%	XP_063140496.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments