Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CAH0403543.1 unnamed protein product [Chilo suppressalis] ... Query length: 429 aa

glycine receptor subunit alpha-2 precursor ...

glycine receptor subunit alpha-2 precursor [Danio rerio]

448 aa protein

accession:NP_001161371.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-2 isoform X2 ...

glycine receptor subunit alpha-2 isoform X2 [Mus musculus]

401 aa protein

accession:XP_006528899.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 isoform X3 ...

glycine receptor subunit alpha-3 isoform X3 [Homo sapiens]

409 aa protein

accession:XP_047272153.1

Alignment Sequence Identical proteins

Query: unnamed protein product ...

unnamed protein product [Chilo suppressalis]

429 aa protein

accession:CAH0403543.1

Sequence Identical proteins

Histamine-gated chloride channel subunit 1, isoform B ...

Histamine-gated chloride channel subunit 1, isoform B [Drosophila melanogaster]

422 aa protein

accession:NP_650116.2

Alignment Sequence Identical proteins

Histamine-gated chloride channel subunit 1, isoform A ...

Histamine-gated chloride channel subunit 1, isoform A [Drosophila melanogaster]

426 aa protein

accession:NP_731632.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_650116.2\|	Histamine-gated chloride channel subunit 1, isoform B [Drosophila melanogaster]	663	663	92%	0.0	83.88%	NP_650116.2
2 Select seq ref\|NP_001161371.1\|	glycine receptor subunit alpha-2 precursor [Danio rerio]	276	276	87%	2e-87	39.19%	NP_001161371.1
3 Select seq ref\|XP_006528899.1\|	glycine receptor subunit alpha-2 isoform X2 [Mus musculus]	263	263	86%	5e-83	37.28%	XP_006528899.1
4 Select seq ref\|XP_047272153.1\|	glycine receptor subunit alpha-3 isoform X3 [Homo sapiens]	263	263	86%	6e-83	37.47%	XP_047272153.1
5 Select seq ref\|NP_731632.1\|	Histamine-gated chloride channel subunit 1, isoform A [Drosophila melanogaster]	660	660	92%	0.0	83.88%	NP_731632.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments