Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
CAJ0893870.1
partial photosynthetic reaction center L subunit, partial [freshwater sediment metagenome]
...
Query length:
206 aa
DOMAINS: and other(s) domains
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Query: partial photosynthetic reaction center L subunit, partial
...
partial photosynthetic reaction center L subunit, partial [freshwater sediment metagenome]
206 aa protein
accession:CAJ0893870.1
photosystem II D2 protein (photosystem q(a) protein)
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photosystem II D2 protein (photosystem q(a) protein) [Microcystis aeruginosa]
349 aa protein
accession:WP_061432924.1
photosystem II D2 protein (photosystem q(a) protein)
...
photosystem II D2 protein (photosystem q(a) protein) [Microcystis]
351 aa protein
accession:WP_002737445.1
photosystem II protein D2
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photosystem II protein D2 [Glycine max]
353 aa protein
accession:YP_538760.1
photosystem II protein D2
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photosystem II protein D2 [Arabidopsis thaliana]
353 aa protein
accession:NP_051054.1
photosystem II D2 protein (photosystem q(a) protein)
...
photosystem II D2 protein (photosystem q(a) protein) [Synechocystis]
352 aa protein
accession:WP_010872429.1
DOMAINS: and other(s) domains
...
partial photosynthetic reaction center L subunit, partial [freshwater sediment metagenome]
206 aa protein
accession:CAJ0893870.1
photosystem II D2 protein (photosystem q(a) protein) [Microcystis aeruginosa]
349 aa protein
accession:WP_061432924.1
photosystem II D2 protein (photosystem q(a) protein) [Microcystis]
351 aa protein
accession:WP_002737445.1
photosystem II protein D2 [Glycine max]
353 aa protein
accession:YP_538760.1
photosystem II protein D2 [Arabidopsis thaliana]
353 aa protein
accession:NP_051054.1
photosystem II D2 protein (photosystem q(a) protein) [Synechocystis]
352 aa protein
accession:WP_010872429.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 44.7 | 44.7 | 54% | 2e-04 | 27.43% | WP_061432924.1 | |
| 2 | 44.7 | 44.7 | 54% | 3e-04 | 27.43% | WP_002737445.1 | |
| 3 | 43.1 | 43.1 | 54% | 0.001 | 25.66% | YP_538760.1 | |
| 4 | 43.1 | 43.1 | 54% | 0.001 | 27.43% | WP_010872429.1 | |
| 5 | 42.7 | 42.7 | 54% | 0.001 | 25.66% | NP_051054.1 |