Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
CAQ45516.1
putative ECF-type RNA polymerase sigma factor [Stenotrophomonas maltophilia K279a]
...
Query length:
230 aa
DOMAINS: and other(s) domains
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RNA polymerase sigma factor SigM
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RNA polymerase sigma factor SigM [Mycobacterium tuberculosis]
222 aa protein
accession:WP_010886185.1
ECF subfamily RNA polymerase sigma factor, BldN family
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ECF subfamily RNA polymerase sigma factor, BldN family [Streptomyces]
264 aa protein
accession:WP_003975513.1
sigma-70 family RNA polymerase sigma factor
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sigma-70 family RNA polymerase sigma factor [Synechocystis]
185 aa protein
accession:WP_190598556.1
ECF family RNA polymerase sigma factor SbrI
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ECF family RNA polymerase sigma factor SbrI [Pseudomonas]
194 aa protein
accession:WP_003119848.1
Query: putative ECF-type RNA polymerase sigma factor
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putative ECF-type RNA polymerase sigma factor [Stenotrophomonas maltophilia K279a]
230 aa protein
accession:CAQ45516.1
sigma-70 family RNA polymerase sigma factor
...
sigma-70 family RNA polymerase sigma factor [Shewanella oneidensis]
200 aa protein
accession:WP_011073380.1
DOMAINS: and other(s) domains
...
RNA polymerase sigma factor SigM [Mycobacterium tuberculosis]
222 aa protein
accession:WP_010886185.1
ECF subfamily RNA polymerase sigma factor, BldN family [Streptomyces]
264 aa protein
accession:WP_003975513.1
sigma-70 family RNA polymerase sigma factor [Synechocystis]
185 aa protein
accession:WP_190598556.1
ECF family RNA polymerase sigma factor SbrI [Pseudomonas]
194 aa protein
accession:WP_003119848.1
putative ECF-type RNA polymerase sigma factor [Stenotrophomonas maltophilia K279a]
230 aa protein
accession:CAQ45516.1
sigma-70 family RNA polymerase sigma factor [Shewanella oneidensis]
200 aa protein
accession:WP_011073380.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 129 | 129 | 76% | 4e-36 | 44.94% | WP_003119848.1 | |
| 2 | 122 | 122 | 76% | 4e-33 | 38.55% | WP_011073380.1 | |
| 3 | 57.0 | 57.0 | 71% | 2e-08 | 28.48% | WP_010886185.1 | |
| 4 | 54.3 | 54.3 | 65% | 2e-07 | 24.34% | WP_003975513.1 | |
| 5 | 46.6 | 46.6 | 74% | 5e-05 | 28.41% | WP_190598556.1 |