Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CDC41158.1 spermidine/putrescine transport system permease protein [Firmicutes bacterium CAG:449] ... Query length: 265 aa

Query: spermidine/putrescine transport system permease protein ...

spermidine/putrescine transport system permease protein [Firmicutes bacterium CAG:449]

265 aa protein

accession:CDC41158.1

Sequence Identical proteins

ABC transporter permease ...

ABC transporter permease [Clostridioides difficile]

278 aa protein

accession:WP_003432157.1

Alignment Sequence Identical proteins

putrescine ABC transporter permease PotH ...

putrescine ABC transporter permease PotH [Escherichia coli]

317 aa protein

accession:WP_000105427.1

Alignment Sequence Identical proteins

ABC transporter permease subunit ...

ABC transporter permease subunit [Shewanella oneidensis]

301 aa protein

accession:WP_011071491.1

Alignment Sequence Identical proteins

ABC transporter permease subunit ...

ABC transporter permease subunit [Pseudomonas]

293 aa protein

accession:WP_003121722.1

Alignment Sequence Identical proteins

spermidine/putrescine ABC transporter permease PotB ...

spermidine/putrescine ABC transporter permease PotB [Enterobacteriaceae]

275 aa protein

accession:WP_001336525.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003432157.1\|	ABC transporter permease [Clostridioides difficile]	194	194	96%	8e-60	36.73%	WP_003432157.1
2 Select seq ref\|WP_000105427.1\|	putrescine ABC transporter permease PotH [Escherichia coli]	146	146	81%	9e-41	34.48%	WP_000105427.1
3 Select seq ref\|WP_001336525.1\|	spermidine/putrescine ABC transporter permease PotB [Enterobacteriaceae]	144	144	93%	2e-40	33.09%	WP_001336525.1
4 Select seq ref\|WP_011071491.1\|	ABC transporter permease subunit [Shewanella oneidensis]	139	139	97%	2e-38	31.65%	WP_011071491.1
5 Select seq ref\|WP_003121722.1\|	ABC transporter permease subunit [Pseudomonas]	132	132	75%	1e-35	35.51%	WP_003121722.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments