Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
CDO56645.1
similar to Saccharomyces cerevisiae YER007C-A TMA20 Protein of unknown function that associates with ribosomes and has a putative RNA binding domain [Geotrichum candidum]
...
Query length:
183 aa
DOMAINS: and other(s) domains
...
PUA domain-containing protein
...
PUA domain-containing protein [Caenorhabditis elegans]
185 aa protein
accession:NP_741412.1
uncharacterized protein LOC100305623
...
uncharacterized protein LOC100305623 [Glycine max]
181 aa protein
accession:NP_001238113.1
pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein
...
pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein [Arabidopsis thaliana]
181 aa protein
accession:NP_172387.1
RNA-binding protein Tma20
...
RNA-binding protein Tma20 [Schizosaccharomyces pombe]
181 aa protein
accession:NP_596574.2
Query: similar to Saccharomyces cerevisiae YER007C-A TMA20 Protein of unknown function that associates with ribosomes and has a putative RNA binding domain
...
similar to Saccharomyces cerevisiae YER007C-A TMA20 Protein of unknown function that associates with ribosomes and has a putative RNA binding domain [Geotrichum candidum]
183 aa protein
accession:CDO56645.1
translation machinery-associated protein 20
...
translation machinery-associated protein 20 [Saccharomyces cerevisiae S288C]
181 aa protein
accession:NP_010923.3
DOMAINS: and other(s) domains
...
PUA domain-containing protein [Caenorhabditis elegans]
185 aa protein
accession:NP_741412.1
uncharacterized protein LOC100305623 [Glycine max]
181 aa protein
accession:NP_001238113.1
pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein [Arabidopsis thaliana]
181 aa protein
accession:NP_172387.1
RNA-binding protein Tma20 [Schizosaccharomyces pombe]
181 aa protein
accession:NP_596574.2
similar to Saccharomyces cerevisiae YER007C-A TMA20 Protein of unknown function that associates with ribosomes and has a putative RNA binding domain [Geotrichum candidum]
183 aa protein
accession:CDO56645.1
translation machinery-associated protein 20 [Saccharomyces cerevisiae S288C]
181 aa protein
accession:NP_010923.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 241 | 241 | 96% | 6e-81 | 64.41% | NP_010923.3 | |
| 2 | 199 | 199 | 96% | 2e-64 | 53.93% | NP_596574.2 | |
| 3 | 189 | 189 | 98% | 1e-60 | 53.01% | NP_741412.1 | |
| 4 | 186 | 186 | 98% | 3e-59 | 48.33% | NP_001238113.1 | |
| 5 | 181 | 181 | 98% | 2e-57 | 46.67% | NP_172387.1 |