Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CDS31978.1 nuclear receptor 2DBD gamma [Hymenolepis microstoma] ... Query length: 885 aa

knirps-like, isoform B ...

knirps-like, isoform B [Drosophila melanogaster]

647 aa protein

accession:NP_001303368.1

Alignment Sequence Identical proteins

Query: nuclear receptor 2DBD gamma ...

nuclear receptor 2DBD gamma [Hymenolepis microstoma]

885 aa protein

accession:CDS31978.1

Sequence Identical proteins

peroxisome proliferator-activated receptor gamma isoform 3 ...

peroxisome proliferator-activated receptor gamma isoform 3 [Homo sapiens]

248 aa protein

accession:NP_001317544.2

Alignment Sequence Identical proteins

peroxisome proliferator-activated receptor gamma isoform 1 ...

peroxisome proliferator-activated receptor gamma isoform 1 [Mus musculus]

475 aa protein

accession:NP_001120802.1

Alignment Sequence Identical proteins

nuclear receptor subfamily 1 group D member 1 ...

nuclear receptor subfamily 1 group D member 1 [Danio rerio]

637 aa protein

accession:NP_991292.2

Alignment Sequence Identical proteins

Nuclear hormone receptor family member nhr-23 ...

Nuclear hormone receptor family member nhr-23 [Caenorhabditis elegans]

439 aa protein

accession:NP_001032969.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001303368.1\|	knirps-like, isoform B [Drosophila melanogaster]	110	173	21%	1e-23	56.98%	NP_001303368.1
2 Select seq ref\|NP_001317544.2\|	peroxisome proliferator-activated receptor gamma isoform 3 [Homo sapiens]	99.8	158	26%	6e-22	43.51%	NP_001317544.2
3 Select seq ref\|NP_001120802.1\|	peroxisome proliferator-activated receptor gamma isoform 1 [Mus musculus]	103	164	27%	1e-21	40.85%	NP_001120802.1
4 Select seq ref\|NP_991292.2\|	nuclear receptor subfamily 1 group D member 1 [Danio rerio]	103	160	24%	2e-21	43.97%	NP_991292.2
5 Select seq ref\|NP_001032969.1\|	Nuclear hormone receptor family member nhr-23 [Caenorhabditis elegans]	98.6	155	22%	3e-20	43.14%	NP_001032969.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments