Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
CDX07110.1
glycoprotein,Internalin-J precursor,E3 ubiquitin-protein ligase SlrP,Leucine Rich repeats (2 copies) [Shigella flexneri]
...
Query length:
317 aa
DOMAINS: and other(s) domains
...
oligodendrocyte-myelin glycoprotein precursor
...
oligodendrocyte-myelin glycoprotein precursor [Mus musculus]
443 aa protein
accession:NP_062282.2
leucine-rich repeat transmembrane neuronal protein 1
...
leucine-rich repeat transmembrane neuronal protein 1 [Danio rerio]
524 aa protein
accession:XP_005160139.1
leucine-rich repeat transmembrane neuronal protein 1 precursor
...
leucine-rich repeat transmembrane neuronal protein 1 precursor [Rattus norvegicus]
523 aa protein
accession:NP_001382551.1
flightless I
...
flightless I [Drosophila melanogaster]
1256 aa protein
accession:NP_525097.1
Query: glycoprotein,Internalin-J precursor,E3 ubiquitin-protein ligase SlrP,Leucine Rich repeats (2 copies)
...
glycoprotein,Internalin-J precursor,E3 ubiquitin-protein ligase SlrP,Leucine Rich repeats (2 copies) [Shigella flexneri]
317 aa protein
accession:CDX07110.1
T3SS effector leucine-rich repeat protein EspR1
...
T3SS effector leucine-rich repeat protein EspR1 [Escherichia coli]
419 aa protein
accession:WP_000671689.1
DOMAINS: and other(s) domains
...
oligodendrocyte-myelin glycoprotein precursor [Mus musculus]
443 aa protein
accession:NP_062282.2
leucine-rich repeat transmembrane neuronal protein 1 [Danio rerio]
524 aa protein
accession:XP_005160139.1
leucine-rich repeat transmembrane neuronal protein 1 precursor [Rattus norvegicus]
523 aa protein
accession:NP_001382551.1
flightless I [Drosophila melanogaster]
1256 aa protein
accession:NP_525097.1
glycoprotein,Internalin-J precursor,E3 ubiquitin-protein ligase SlrP,Leucine Rich repeats (2 copies) [Shigella flexneri]
317 aa protein
accession:CDX07110.1
T3SS effector leucine-rich repeat protein EspR1 [Escherichia coli]
419 aa protein
accession:WP_000671689.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 385 | 385 | 74% | 7e-132 | 88.61% | WP_000671689.1 | |
| 2 | 61.2 | 61.2 | 61% | 5e-09 | 27.23% | XP_005160139.1 | |
| 3 | 55.1 | 55.1 | 61% | 5e-07 | 23.26% | NP_001382551.1 | |
| 4 | 54.3 | 54.3 | 43% | 7e-07 | 35.62% | NP_062282.2 | |
| 5 | 53.1 | 53.1 | 60% | 3e-06 | 27.94% | NP_525097.1 |