Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EAW84689.1
LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), isoform CRA_d [Homo sapiens]
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Query length:
159 aa
DOMAINS: and other(s) domains
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mRNA splicing protein SMD3
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mRNA splicing protein SMD3 [Saccharomyces cerevisiae S288C]
101 aa protein
accession:NP_013248.1
Query: LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), isoform CRA_d
...
LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), isoform CRA_d [Homo sapiens]
159 aa protein
accession:EAW84689.1
U6 snRNA-associated Sm-like protein LSm4 isoform X1
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U6 snRNA-associated Sm-like protein LSm4 isoform X1 [Rattus norvegicus]
138 aa protein
accession:XP_063131228.1
U6 snRNA-associated Sm-like protein LSm4, putative
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U6 snRNA-associated Sm-like protein LSm4, putative [Plasmodium falciparum 3D7]
126 aa protein
accession:XP_001347757.2
U6 snRNP-associated protein Lsm4
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U6 snRNP-associated protein Lsm4 [Schizosaccharomyces pombe]
121 aa protein
accession:NP_001342832.1
uncharacterized protein LOC100795851 isoform X1
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uncharacterized protein LOC100795851 isoform X1 [Glycine max]
191 aa protein
accession:XP_040868632.1
DOMAINS: and other(s) domains
...
mRNA splicing protein SMD3 [Saccharomyces cerevisiae S288C]
101 aa protein
accession:NP_013248.1
LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), isoform CRA_d [Homo sapiens]
159 aa protein
accession:EAW84689.1
U6 snRNA-associated Sm-like protein LSm4 isoform X1 [Rattus norvegicus]
138 aa protein
accession:XP_063131228.1
U6 snRNA-associated Sm-like protein LSm4, putative [Plasmodium falciparum 3D7]
126 aa protein
accession:XP_001347757.2
U6 snRNP-associated protein Lsm4 [Schizosaccharomyces pombe]
121 aa protein
accession:NP_001342832.1
uncharacterized protein LOC100795851 isoform X1 [Glycine max]
191 aa protein
accession:XP_040868632.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 105 | 105 | 31% | 7e-29 | 98.00% | XP_063131228.1 | |
| 2 | 96.7 | 96.7 | 30% | 9e-25 | 89.80% | XP_040868632.1 | |
| 3 | 71.2 | 71.2 | 31% | 1e-15 | 58.00% | XP_001347757.2 | |
| 4 | 70.9 | 70.9 | 28% | 2e-15 | 69.57% | NP_001342832.1 | |
| 5 | 48.5 | 48.5 | 32% | 3e-07 | 45.10% | NP_013248.1 |