Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: EDK98945.1 vacuolar protein sorting 24 (yeast), isoform CRA_a [Mus musculus] ... Query length: 102 aa

Charged multivesicular body protein 3 ...

Charged multivesicular body protein 3 [Caenorhabditis elegans]

208 aa protein

accession:NP_494919.1

Alignment Sequence Identical proteins

charged multivesicular body protein 3 ...

charged multivesicular body protein 3 [Danio rerio]

221 aa protein

accession:NP_998485.1

Alignment Sequence Identical proteins

charged multivesicular body protein 3 isoform 3 ...

charged multivesicular body protein 3 isoform 3 [Homo sapiens]

182 aa protein

accession:NP_001180446.1

Alignment Sequence Identical proteins

charged multivesicular body protein 3 isoform X1 ...

charged multivesicular body protein 3 isoform X1 [Rattus norvegicus]

197 aa protein

accession:XP_006236693.1

Alignment Sequence Identical proteins

Query: vacuolar protein sorting 24 (yeast), isoform CRA_a ...

vacuolar protein sorting 24 (yeast), isoform CRA_a [Mus musculus]

102 aa protein

accession:EDK98945.1

Sequence Identical proteins

charged multivesicular body protein 3 isoform X1 ...

charged multivesicular body protein 3 isoform X1 [Mus musculus]

158 aa protein

accession:XP_006506544.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001180446.1\|	charged multivesicular body protein 3 isoform 3 [Homo sapiens]	142	142	91%	2e-43	68.99%	NP_001180446.1
2 Select seq ref\|XP_006506544.1\|	charged multivesicular body protein 3 isoform X1 [Mus musculus]	101	101	57%	2e-27	100.00%	XP_006506544.1
3 Select seq ref\|XP_006236693.1\|	charged multivesicular body protein 3 isoform X1 [Rattus norvegicus]	101	185	96%	5e-27	100.00%	XP_006236693.1
4 Select seq ref\|NP_998485.1\|	charged multivesicular body protein 3 [Danio rerio]	80.9	145	95%	9e-19	81.82%	NP_998485.1
5 Select seq ref\|NP_494919.1\|	Charged multivesicular body protein 3 [Caenorhabditis elegans]	57.4	57.4	43%	5e-10	56.82%	NP_494919.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments