Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EDL17288.1
retinoblastoma binding protein 6, isoform CRA_f [Mus musculus]
...
Query length:
1741 aa
DOMAINS: and other(s) domains
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hypothetical protein DDB_G0279003
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hypothetical protein DDB_G0279003 [Dictyostelium discoideum AX4]
775 aa protein
accession:XP_641899.1
RBBP6 family ubiquitin-protein ligase E3
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RBBP6 family ubiquitin-protein ligase E3 [Schizosaccharomyces pombe]
482 aa protein
accession:NP_001342771.1
cleavage polyadenylation factor subunit MPE1
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cleavage polyadenylation factor subunit MPE1 [Saccharomyces cerevisiae S288C]
441 aa protein
accession:NP_012864.1
E3 ubiquitin-protein ligase RBBP6
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E3 ubiquitin-protein ligase RBBP6 [Caenorhabditis elegans]
1128 aa protein
accession:NP_001370024.1
Query: retinoblastoma binding protein 6, isoform CRA_f
...
retinoblastoma binding protein 6, isoform CRA_f [Mus musculus]
1741 aa protein
accession:EDL17288.1
E3 ubiquitin-protein ligase RBBP6 isoform X2
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E3 ubiquitin-protein ligase RBBP6 isoform X2 [Danio rerio]
278 aa protein
accession:XP_021328115.1
DOMAINS: and other(s) domains
...
hypothetical protein DDB_G0279003 [Dictyostelium discoideum AX4]
775 aa protein
accession:XP_641899.1
RBBP6 family ubiquitin-protein ligase E3 [Schizosaccharomyces pombe]
482 aa protein
accession:NP_001342771.1
cleavage polyadenylation factor subunit MPE1 [Saccharomyces cerevisiae S288C]
441 aa protein
accession:NP_012864.1
E3 ubiquitin-protein ligase RBBP6 [Caenorhabditis elegans]
1128 aa protein
accession:NP_001370024.1
retinoblastoma binding protein 6, isoform CRA_f [Mus musculus]
1741 aa protein
accession:EDL17288.1
E3 ubiquitin-protein ligase RBBP6 isoform X2 [Danio rerio]
278 aa protein
accession:XP_021328115.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 248 | 248 | 12% | 2e-73 | 51.48% | XP_021328115.1 | |
| 2 | 224 | 268 | 34% | 1e-58 | 33.80% | NP_001370024.1 | |
| 3 | 184 | 184 | 16% | 1e-48 | 33.43% | NP_001342771.1 | |
| 4 | 158 | 158 | 17% | 3e-40 | 30.42% | NP_012864.1 | |
| 5 | 91.3 | 161 | 15% | 2e-17 | 41.60% | XP_641899.1 |